Clinical Chemistry Link to Randox Laboratories Web Site
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


Clinical Chemistry 48: 2131-2140, 2002;
This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Submit an electronic Letter to
the Editor about this paper
Right arrow Alert me when this article is cited
Right arrow Alert me when eLetters are posted
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via ISI Web of Science (31)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Bengra, C.
Right arrow Articles by Felder, R. A.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Bengra, C.
Right arrow Articles by Felder, R. A.
Related Collections
Right arrow Molecular Diagnostics and Genetics
Right arrow Automation and Analytical Techniques
(Clinical Chemistry. 2002;48:2131-2140.)
© 2002 American Association for Clinical Chemistry, Inc.

Genotyping of Essential Hypertension Single-Nucleotide Polymorphisms by a Homogeneous PCR Method with Universal Energy Transfer Primers

Chikh Bengra1, Theodore E. Mifflin1, Yuri Khripin2, Paolo Manunta3, Scott M. Williams4, Pedro A. Jose5 and Robin A. Felder1a

1 The University of Virginia, Department of Pathology, PO Box 800214, Charlottesville, VA 22908.

2 Serologicals Corporation, 202 Perry Parkway, Gaithersburg, MD 20877.

3 University "Vita e Salute San Raffaele", Division of Nephrology, Dialysis, and Hypertension, San Raffaele Hospital, 20132 Milan, Italy.

4 Meharry Medical College, Department of Microbiology, Nashville, TN 37208-3599.

5 Georgetown University Medical Center, Department of Pediatrics and Physiology and Biophysics, 3800 Reservoir Rd., Washington, DC 20007.

aAddress correspondence to this author at: University of Virginia, Department of Pathology/MARC, PO Box 800214, Charlottesville, VA 22908. Fax 434-924-5718; e-mail raf7k{at}virginia.edu.

Background: Human hypertension is a complex, multifactorial disease with a heritability of more than 30–50%. A genetic screening test based on analysis of multiple single-nucleotide polymorphisms (SNPs) to assess the likelihood of developing hypertension would be helpful for disease management.

Methods: Tailed allele-specific primers were designed to amplify by PCR six biallelic SNP loci [three in G protein-coupled receptor kinase type 4 (GRK4): R65L, A142V, and A486V; two in angiotensinogen: -6G->A and M235T; and one in aldosterone synthase: -344C->T] associated with essential hypertension. PCRs of SNP loci were coupled (via a common sequence of 21 nucleotide tails) to incorporate Universal AmplifluorTM primers labeled with fluorescein or sulforhodamine in a homogeneous format. Use of Amplifluors in SNP PCRs produced labeled amplicons, the fluorescence of which was quantified by a microplate reader and then analyzed via an Excel macro to provide genotypes for all six SNP loci. Unique restriction endonucleases were identified for five SNP loci that could independently confirm homogeneous PCR results when needed.

Results: We developed six homogeneous PCR assays that were set up, performed, and fluorometrically analyzed in 96-well microplates. Allele frequencies were determined for six SNPs in 60 Italian hypertensive patients and a control group of 60 normotensive persons. A significant correlation (P = 0.034) between one SNP [GRK4 (A486V)] and the hypertensive patients was observed. Genotyping results for five of six SNPs were confirmed by digesting corresponding amplicons with locus-specific restriction endonucleases.

Conclusions: We developed a simple and homogeneous fluorescent protocol that has been used to determine the SNP genotype for six loci in a population of hypertensive and normotensive persons. We also observed a significant association (P = 0.034) between one SNP (A486V) and an Italian population of mildly hypertensive patients.




The following articles in journals at HighWire Press have cited this article:


Home page
HypertensionHome page
C. Zeng, V. A. M. Villar, G. M. Eisner, S. M. Williams, R. A. Felder, and P. A. Jose
G Protein-Coupled Receptor Kinase 4: Role in Blood Pressure Regulation
Hypertension, June 1, 2008; 51(6): 1449 - 1455.
[Full Text] [PDF]


Home page
HypertensionHome page
T. V. Pereira, A. C.F. Nunes, M. Rudnicki, Y. Yamada, A. C. Pereira, and J. E. Krieger
Meta-Analysis of the Association of 4 Angiotensinogen Polymorphisms With Essential Hypertension: A Role Beyond M235T?
Hypertension, March 1, 2008; 51(3): 778 - 783.
[Abstract] [Full Text] [PDF]


Home page
Am. J. Physiol. Heart Circ. Physiol.Home page
Z. Wang, I. Armando, L. D. Asico, C. Escano, X. Wang, Q. Lu, R. A. Felder, C. G. Schnackenberg, D. R. Sibley, G. M. Eisner, et al.
The elevated blood pressure of human GRK4{gamma} A142V transgenic mice is not associated with increased ROS production
Am J Physiol Heart Circ Physiol, May 1, 2007; 292(5): H2083 - H2092.
[Abstract] [Full Text] [PDF]


Home page
J. Gerontol. A Biol. Sci. Med. Sci.Home page
M. J. Neville, R. Clarke, J. G. Evans, D. C. Rubinsztein, and F. Karpe
Absence of Relationship Between MTTP Haplotypes and Longevity
J. Gerontol. A Biol. Sci. Med. Sci., February 1, 2007; 62(2): 202 - 205.
[Abstract] [Full Text] [PDF]


Home page
DiabetesHome page
M. Desai, E. Zeggini, V. A. Horton, K. R. Owen, A. T. Hattersley, J. C. Levy, G. A. Hitman, M. Walker, R. R. Holman, M. I. McCarthy, et al.
The Variable Number of Tandem Repeats Upstream of the Insulin Gene Is a Susceptibility Locus for Latent Autoimmune Diabetes in Adults
Diabetes, June 1, 2006; 55(6): 1890 - 1894.
[Abstract] [Full Text] [PDF]


Home page
HypertensionHome page
H. Sanada, J. Yatabe, S. Midorikawa, T. Katoh, S. Hashimoto, T. Watanabe, J. Xu, Y. Luo, X. Wang, C. Zeng, et al.
Amelioration of Genetic Hypertension by Suppression of Renal G Protein-Coupled Receptor Kinase Type 4 Expression
Hypertension, June 1, 2006; 47(6): 1131 - 1139.
[Abstract] [Full Text] [PDF]


Home page
Clin. Chem.Home page
H. Sanada, J. Yatabe, S. Midorikawa, S. Hashimoto, T. Watanabe, J. H. Moore, M. D. Ritchie, S. M. Williams, J. C. Pezzullo, M. Sasaki, et al.
Single-Nucleotide Polymorphisms for Diagnosis of Salt-Sensitive Hypertension
Clin. Chem., March 1, 2006; 52(3): 352 - 360.
[Abstract] [Full Text] [PDF]


Home page
Clin. Chem.Home page
D. R. Warden and H. Refsum
Detection of Single-Nucleotide Polymorphisms by PCR with Universal Energy Transfer-Labeled Primers: Application to Folate- and Cobalamin-Related Genes
Clin. Chem., September 1, 2005; 51(9): 1713 - 1716.
[Full Text] [PDF]


Home page
Clin. Chem.Home page
L. M. Silverman and T. M. Mifflin
Genotype-Phenotype Correlations (II): Assessing the Influence of Sequence Variants on the Clinical Phenotype in Multifactorial Disorders
Clin. Chem., June 1, 2005; 51(6): 929 - 930.
[Full Text] [PDF]


Home page
Physiol. GenomicsHome page
C. Zeng, H. Sanada, H. Watanabe, G. M. Eisner, R. A. Felder, and P. A. Jose
Functional genomics of the dopaminergic system in hypertension
Physiol Genomics, November 17, 2004; 19(3): 233 - 246.
[Abstract] [Full Text] [PDF]


Home page
Clin. Chem.Home page
S.-S. Wang, K. Thornton, A. M. Kuhn, J. G. Nadeau, and T. J. Hellyer
Homogeneous Real-Time Detection of Single-Nucleotide Polymorphisms by Strand Displacement Amplification on the BD ProbeTec ET System
Clin. Chem., October 1, 2003; 49(10): 1599 - 1607.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
Copyright © 2002 by the American Association for Clinical Chemistry.