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Clinical Chemistry 46: 1420-1422, 2000;
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(Clinical Chemistry. 2000;46:1420-1422.)
© 2000 American Association for Clinical Chemistry, Inc.


Technical Briefs

Relationship of p16 Methylation Status and Serum {alpha}-Fetoprotein Concentration in Hepatocellular Carcinoma Patients

Ivy H.N. Wong1,a, Y.M. Dennis Lo2, Paul B.S. Lai3 and Philip J. Johnson4

1 Departments of Anatomical and Cellular Pathology,
2 Chemical Pathology,
3 Surgery, and
4 Clinical Oncology, The Chinese University of Hong Kong, Prince of Wales Hospital, Shatin, New Territories, Hong Kong Special Administrative Region
a author for correspondence: fax 852-2712-2719, e-mail wkc-mok{at}wkc.hkcampus.net

Detection of tumor-derived genetic and epigenetic alterations in plasma and serum may have a profound impact on the noninvasive diagnosis of cancers among high-risk populations (1)(2)(3). Chronic hepatitis infection and cirrhosis are well-documented risk factors for hepatocellular carcinoma (HCC) (4). However, patients with chronic hepatitis/cirrhosis may develop HCC only after many years. One long-sought goal in this field, therefore, has been the development of sensitive, specific, and noninvasive blood tests for the early detection and monitoring of HCC (5). A well-established conventional marker for HCC, serum {alpha}-fetoprotein (AFP), has limitations for cancer screening because high-risk individuals with AFP concentrations within the reference interval may have already developed HCC at an advanced stage (6)(7). Hypermethylation of p16, a cyclin-dependent kinase inhibitor gene that regulates cell cycling, has been found frequently in human cancers, including HCC (3)(8). Using methylation-specific PCR (MSP), we analyzed p16 promoter methylation status in 100 plasma and serum samples from HCC patients, controls with chronic hepatitis/cirrhosis, and healthy subjects. Of particular diagnostic interest, we investigated the relationship of p16 methylation status and the serum AFP concentration.

With informed consent and ethics approval, peripheral blood samples were obtained from 45 HCC patients before surgical resection, 35 non-HCC patients with chronic hepatitis/cirrhosis, and 20 healthy volunteers. The diagnosis of HCC was confirmed histopathologically in liver biopsy and was based on serum AFP concentration >=500 µg/L, ultrasound examination with computed tomography, or hepatic angiography as appropriate. Tumor specimens were collected from the HCC patients after surgery, and DNA was extracted using a QIAamp Tissue Kit (Qiagen). Peripheral blood samples were centrifuged at 3000g, and plasma and serum samples were collected from EDTA-containing and plain tubes, respectively. DNA was extracted from 400 µL of plasma or serum by a QIAamp Blood Kit (Qiagen).

Bisulfite modification of DNA was conducted using the CpGenome DNA Modification Kit (Intergen). Bisulfite-treated DNA was amplified using primers for the methylated p16 sequence (3)(9). The sense and antisense primers for the methylated p16 sequence were 5'-TTA TTA GAG GGT GGG GCG GAT CGC-3' and 5'-GAC CCC GAA CCG CGA CCG TAA-3', respectively. All bisulfite-converted DNA samples were also amplified using primers for the unmethylated p16 sequence. The sense and antisense primers for the unmethylated p16 sequence were 5'-TTA TTA GAG GGT GGG GTG GAT TGT-3' and 5'-CAA CCC CAA ACC ACA ACC ATA A-3', respectively. PCR was conducted using the GeneAmp DNA Amplification Reagent Kit and AmpliTaq Gold polymerase (Perkin-Elmer). Using 35 cycles for tumor DNA and 55 cycles for circulating DNA, the thermal profile consisted of an initial denaturation step of 95 °C for 12 min followed by repetitions of 95 °C for 45 s, 60 °C for 45 s, and 72 °C for 60 s, with a final extension step of 72 °C for 10 min (3)(10). PCR products were loaded onto 2% agarose gel and stained with ethidium bromide. Each sample was analyzed in duplicate, in parallel with a methylated cell line (see below), unmethylated controls, and multiple negative water blanks. The identity of the PCR product for the methylated p16 sequence was confirmed by nonradioactive Southern blot analysis (11). The probe sequence designed to hybridize to the methylated p16 sequence was 5'-GAG TAG TAT GGA GTT TTC GGT TGA TTG GTT G-3'.

A plasmacytoma-derived cell line, HS-Sultan (CRL-1484; American Type Culture Collection), previously shown to have p16 methylation by Southern blot analysis (12), was used as a methylated control for MSP. To determine the sensitivity of MSP, HS-Sultan DNA was serially diluted in water, mixed with normal peripheral blood cell DNA, bisulfite-converted, and then amplified by MSP. The lower detection limit for the methylated p16 allele was 50 pg of HS-Sultan DNA in 1000 ng of buffy coat DNA from a healthy volunteer.

Preoperative serum AFP concentrations were measured by a two-site sandwich immunoassay (Automated Chemiluminescence System 180; Bayer Diagnostics) and were correlated with the p16 methylation status in plasma or serum from the 45 HCC patients and the 35 non-HCC patients with chronic hepatitis/cirrhosis. The relationship between the p16 methylation status and the serum AFP concentration was assessed using ROC curves and the Fisher exact test.

We demonstrated the presence of methylated p16 sequences in plasma or serum from 80% (24 of 30) of HCC patients with tumoral p16 methylation (Table 1 ). Among the 30 HCC patients with tumoral p16 methylation, we found a significant association between the p16 methylation status in circulating DNA and the preoperative serum AFP concentration. A serum AFP concentration of 45 µg/L was found to give the best discrimination between HCC patients with or without p16 methylation in circulating DNA (MedCalc 5.0). Thus, all 16 cases (100%) with serum AFP concentrations >45 µg/L showed p16 methylation in circulating DNA (Fig. 1 ), whereas only 57% (8 of 14) of cases with AFP concentrations <=45 µg/L (range, 4–45 µg/L) had p16 methylation (specificity = 100%; sensitivity = 67%; MedCalc 5.0). The difference in the proportion of HCC patients with circulating methylated p16 sequences between the two groups with higher or lower AFP concentrations was statistically significant (Fisher exact test, P = 0.005). None of the 20 healthy volunteers studied had p16 methylation in plasma or serum. None of the 35 non-HCC patients with chronic hepatitis/cirrhosis had p16 methylation in circulating DNA. Four patients of the latter control group had serum AFP concentrations >45 µg/L, whereas the remaining 31 had AFP concentrations <=45 µg/L.


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Table 1. Relationship between plasma/serum p16 methylation status and serum AFP concentration in 45 HCC patients.



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Figure 1. Preoperative serum AFP concentrations (µg/L) of 30 HCC patients with tumoral p16 methylation.

Twenty-four patients showed p16 methylation in circulating DNA, whereas 6 patients were methylation-negative. A serum AFP concentration of 45 µg/L is indicated by the dashed line. All of the patients with AFP concentrations >45 µg/L had circulating methylated p16 sequences. •, methylation-positive and AFP >45 µg/L; {circ}, methylation-positive and AFP <=45 µg/L; {triangleup}, methylation-negative and AFP <=45 µg/L.

Clinically, serum AFP concentration alone cannot reliably differentiate HCC from benign liver diseases, especially when the concentration is <500 µg/L. In this study, only 29% (13 of 45) of HCC patients had serum AFP concentrations >=500 µg/L (Table 1Up ). For the remaining 71%, diagnostic confirmation based on ultrasonography and angiography was required. Of diagnostic relevance, the application of the p16 methylation marker enabled us to detect circulating tumor DNA in 80% of HCC patients with tumoral p16 methylation. Aberrant p16 methylation may thus serve as a valuable molecular marker for the noninvasive and early diagnosis of HCC among high-risk populations. Indeed, the peripheral blood MSP assay for p16 could identify 53% (24 of 45) of HCC patients, including those who were not detectable by AFP screening alone. The combination of the MSP assay with the AFP test further improved the rate of HCC detection to 62% (28 of 45). Therefore, addition of the p16 methylation marker, detectable in plasma or serum from patients with well-differentiated or early-stage tumors (3), would possibly permit early detection of HCC and hence earlier treatment among high-risk populations. Our data suggest the diagnostic implications of p16 methylation for the noninvasive diagnosis of cancer with potentially higher sensitivity and specificity.

For disease monitoring, an increased serum AFP concentration (>10 µg/L) is generally applied as one of the useful criteria. However, clinical metastasis and recurrence might also be present in HCC patients with serum AFP concentrations within the reference interval. We currently are studying the usefulness of the peripheral blood MSP analysis for monitoring minimal residual tumor or micrometastasis, especially among HCC patients with serum AFP concentrations within the reference range during clinical follow-up.

Of biological interest, we report for the first time a statistically significant correlation between the p16 methylation status in circulating DNA and the preoperative serum AFP concentration. Among the HCC patients with tumoral p16 methylation, 100% of the cases with serum AFP concentrations >45 µg/L had circulating methylated p16 sequences, whereas only 57% of patients with AFP concentrations <=45 µg/L had p16 methylation. None of the 35 non-HCC patients with chronic hepatitis/cirrhosis, regardless of their AFP concentrations, had p16 methylation in circulating DNA. Although the biological basis of this relationship remains unclear at present, our findings may stimulate further investigations into the correlations of conventional tumor markers with the new generation of molecular markers based on DNA analysis in plasma and serum.


Acknowledgments

This work was partially supported by grants from the Hong Kong Research Grants Council, the Direct Grants Scheme from the Chinese University of Hong Kong, the Industrial Support Fund, and the Kadoorie Charitable Foundation for the Hong Kong Cancer Genetics Research Group.


References

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  3. Wong IHN, Lo YMD, Zhang J, Liew CT, Ng MHL, Wong N, et al. Detection of aberrant p16 methylation in the plasma and serum of liver cancer patients. Cancer Res 1999;59:71-73.[Abstract/Free Full Text]
  4. Chen CJ, Yu MW, Liaw YF. Epidemiological characteristics and risk factors of hepatocellular carcinoma. J Gastroenterol Hepatol 1997;12:S294-S308.[Web of Science][Medline] [Order article via Infotrieve]
  5. Wong IHN, Lau WY, Leung T, Yeo W, Johnson PJ. Hematogenous dissemination of hepatocytes and tumor cells following surgical resection of hepatocellular carcinoma: a quantitative analysis. Clin Cancer Res 1999;5:4021-4027.[Abstract/Free Full Text]
  6. Chen DS, Sung JL, Sheu JC, Lai MY, How SW, Hsu HC, et al. Serum {alpha}-fetoprotein in the early stage of human hepatocellular carcinoma. Gastroenterology 1984;86:1404-1409.[Web of Science][Medline] [Order article via Infotrieve]
  7. Kubo Y, Okuda K, Musha H, Nakashima T. Detection of hepatocellular carcinoma during a clinical follow-up of chronic liver disease: observations in 31 patients. Gastroenterology 1978;74:578-582.[Web of Science][Medline] [Order article via Infotrieve]
  8. Lo YMD, Wong IHN, Zhang J, Tein MS, Ng MHL, Hjelm NM. Quantitative analysis of aberrant p16 methylation using real-time quantitative methylation-specific polymerase chain reaction. Cancer Res 1999;59:3899-3903.[Abstract/Free Full Text]
  9. Herman JG, Graff JR, Myohanen S, Nelkin BD, Baylin SB. Methylation-specific PCR. A novel PCR assay for methylation status of CpG islands. Proc Natl Acad Sci U S A 1996;93:9821-9826.[Abstract/Free Full Text]
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  12. Wong IHN, Ng MHL, Lee JCK, Lo KW, Chung YF, Huang DP. Transcriptional silencing of the p16 gene in human myeloma-derived cell lines by hypermethylation. Br J Haematol 1998;103:168-175.[Web of Science][Medline] [Order article via Infotrieve]



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